C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 51 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000089144 vps51-001 ENSDARG00000062016 7955 + 10:27597458-27607923 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000089144
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000089144 4.906±3.84 2.298±1.55 2.651±2.62 0.307±0.00 1.321±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005O4 CIL_0005O4_0001 CGP 10:27597458-27613869

Gene Ontology

GO IDEvidence TypeGO Description
GO:0017119 IEA Golgi transport complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000279281 VPS51-001 protein_coding Homo_sapiens 0 200
ENST00000526578 VPS51-003 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000528050 VPS51-016 retained_intron Homo_sapiens 1e-18 97
ENST00000528588 VPS51-015 protein_coding Homo_sapiens 6e-29 132
ENST00000529180 VPS51-007 protein_coding Homo_sapiens 3.99931e-42 176
ENST00000530773 VPS51-011 protein_coding Homo_sapiens 2e-18 97
ENST00000533656 VPS51-005 retained_intron Homo_sapiens 3e-18 97
ENST00000534124 VPS51-006 nonsense_mediated_decay Homo_sapiens 3e-18 97
ENST00000534557 VPS51-004 protein_coding Homo_sapiens 0 195
ENST00000565115 RP11-382N13.6-001 processed_pseudogene Homo_sapiens 0.000000000000002 86

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