C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005O4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062016-ENSDARG00000032816 CGP 7955 10:27597458-27613869
GeneTranscriptPositionBiotype
ENSDARG00000032816 (tm7sf2)
transmembrane 7 superfamily member 2 		ENSDART00000042162 (tm7sf2-001) 27608248-27613869 protein_coding
ENSDART00000143162 (tm7sf2-002) 27608556-27612690 protein_coding
ENSDART00000147302 (tm7sf2-003) 27609094-27612447 retained_intron
ENSDARG00000062016 (vps51)
vacuolar protein sorting 51 homolog (S. cerevisiae) 		ENSDART00000089144 (vps51-001) 27597458-27607923 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005O4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000149823-ENSG00000149809 CGP 9606 11:65089324-65116384
GeneTranscriptPositionBiotype
ENSG00000149823 (VPS51)
vacuolar protein sorting 51 homolog (S. cerevisiae) 		ENST00000279281 (VPS51-001) 65096159-65111860 protein_coding
ENST00000526578 (VPS51-003) 65096479-65107885 protein_coding
ENST00000526856 (VPS51-010) 65109344-65110891 protein_coding
ENST00000527646 (VPS51-013) 65105408-65111707 processed_transcript
ENST00000528050 (VPS51-016) 65096214-65097158 retained_intron
ENST00000528588 (VPS51-015) 65089324-65107628 protein_coding
ENST00000529180 (VPS51-007) 65096227-65108399 protein_coding
ENST00000530673 (VPS51-014) 65110482-65111672 protein_coding
ENST00000530773 (VPS51-011) 65096115-65108319 protein_coding
ENST00000531146 (VPS51-008) 65109055-65109857 retained_intron
ENST00000533487 (VPS51-002) 65096244-65108020 nonsense_mediated_decay
ENST00000533656 (VPS51-005) 65096227-65107727 retained_intron
ENST00000533827 (VPS51-012) 65109291-65111674 nonsense_mediated_decay
ENST00000534124 (VPS51-006) 65096227-65108350 nonsense_mediated_decay
ENST00000534557 (VPS51-004) 65096753-65108494 protein_coding
ENST00000534591 (VPS51-009) 65109318-65111664 retained_intron
ENSG00000254501 (AP003068.9)
 ENST00000528887 (AP003068.9-001) 65110714-65111695 antisense

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005O4_0001ENSDARG00000032816ENSDART00000042162ENSDART00000143162ENSDART00000147302ENSDARG00000062016ENSDART00000089144CIL_0005O4_0002ENSG00000149823ENST00000279281ENST00000526578ENST00000526856ENST00000527646ENST00000528050ENST00000528588ENST00000529180ENST00000530673ENST00000530773ENST00000531146ENST00000533487ENST00000533656ENST00000533827ENST00000534124ENST00000534557ENST00000534591ENSG00000254501ENST00000528887
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005O4_0001ENSDARG00000032816ENSDART00000042162ENSDART00000143162ENSDART00000147302ENSDARG00000062016ENSDART00000089144CIL_0005O4_0002ENSG00000149823ENST00000279281ENST00000526856ENST00000527646ENST00000528050ENST00000529180ENST00000531146ENSG00000254501ENST00000528887
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000032816 ENSDART00000042162 N/A N/A N/A 4.475±2.35 N/A N/A 0.689±0.02 3.985±3.55 0.768±0.00 N/A 0.723±0.00 N/A N/A N/A
ENSDART00000143162 N/A N/A N/A N/A N/A N/A N/A N/A 0.506±0.00 N/A N/A N/A N/A N/A
ENSDART00000147302 N/A N/A N/A N/A N/A N/A N/A N/A 0.451±0.00 N/A N/A N/A N/A N/A
ENSDARG00000062016 ENSDART00000089144 N/A N/A N/A 4.906±3.84 N/A N/A 2.298±1.55 2.651±2.62 0.307±0.00 N/A 1.321±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000149823 ENST00000279281 N/A 16.602±0.00 2.744±0.00 13.753±8.10 N/A 16.740±13.45 5.499±3.39 10.601±6.50 4.981±0.00 6.373±4.24 18.514±0.00 42.047±36.08 24.993±4.58 21.363±0.00
ENST00000526578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526856 N/A 46.742±0.00 N/A N/A N/A 41.971±0.00 N/A N/A N/A N/A 3.103±0.00 118.867±0.00 N/A 45.124±0.00
ENST00000527646 66.807±0.00 34.993±0.00 N/A N/A N/A 17.128±0.00 N/A 27.518±0.00 17.508±0.00 16.626±0.00 N/A 94.608±0.00 22.839±0.00 27.755±0.00
ENST00000528050 N/A N/A 18.985±0.00 22.585±0.00 18.100±0.00 20.724±0.00 13.884±0.00 27.907±0.00 N/A 11.385±0.00 8.402±0.00 22.564±0.00 N/A N/A
ENST00000528588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529180 N/A N/A N/A N/A 4.574±0.00 N/A N/A N/A 10.446±0.00 N/A N/A 5.693±0.00 30.198±3.58 N/A
ENST00000530673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531146 N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.464±0.00 4.701±0.00 N/A N/A N/A
ENST00000533487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254501 ENST00000528887 N/A N/A N/A 57.383±0.00 N/A 68.225±0.00 35.721±0.00 87.496±0.00 30.975±15.57 45.096±0.00 46.215±0.00 119.728±36.42 68.451±7.86 65.085±2.00

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