C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vacuolar protein sorting 51 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000529180 VPS51-007 ENSG00000149823 9606 + 11:65096227-65108399 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverOvaryPlacentaENST00000529180
Transcript ID Breast Liver Ovary Placenta
ENST00000529180 4.574±0.00 10.446±0.00 5.693±0.00 30.198±3.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005O4 CIL_0005O4_0002 CGP 11:65089324-65116384

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000145 IEA exocyst
GO:0006893 IEA Golgi to plasma membrane transport
GO:0017119 IEA Golgi transport complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025711 Vps51-201 protein_coding Mus_musculus 0 686
ENSMUST00000159211 Vps51-003 retained_intron Mus_musculus 0 686
ENSMUST00000159832 Vps51-001 protein_coding Mus_musculus 0 686
ENSMUST00000160590 Vps51-004 protein_coding Mus_musculus 0 473
ENSMUST00000160233 Vps51-006 nonsense_mediated_decay Mus_musculus 0 261
ENSMUST00000162374 RP23-391B20.4-001 protein_coding Mus_musculus 0 261
ENSMUST00000160519 Vps51-007 retained_intron Mus_musculus 0 219
ENSDART00000089144 vps51-001 protein_coding Danio_rerio 3.99931e-42 176

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