C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chloride channel 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000090260 clcn2-201 ENSDARG00000062427 7955 + 2:16726157-16825889 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000090260
Transcript ID Brain Heart Kidney
ENSDART00000090260 2.952±0.00 0.420±0.19 0.135±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005247 IEA voltage-gated chloride channel activity
GO:0006821 IEA chloride transport
GO:0016020 IEA membrane
GO:0030554 IEA adenyl nucleotide binding
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007207 Clcn2-001 protein_coding Mus_musculus 0 682
ENSMUST00000120099 Clcn2-005 protein_coding Mus_musculus 0 520
ENSMUST00000131522 Clcn2-002 nonsense_mediated_decay Mus_musculus 0 520
ENSMUST00000132512 Clcn2-006 retained_intron Mus_musculus 0 291
ENSMUST00000148131 Clcn2-003 retained_intron Mus_musculus 1e-21 110
ENSMUST00000153075 Clcn2-004 retained_intron Mus_musculus 0 682

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