C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: argonaute RISC catalytic component 3b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000091813 ago3b-001 ENSDARG00000063079 7955 + 19:11283366-11308559 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000091813
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000091813 2.026±0.00 0.201±0.00 0.439±0.17 0.491±0.00 0.380±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097888 Ago1-001 protein_coding Mus_musculus 0 1328
ENSMUST00000127800 Ago1-002 nonsense_mediated_decay Mus_musculus 0 1273
ENST00000220592 AGO2-001 protein_coding Homo_sapiens 0 1033
ENST00000373204 AGO1-002 protein_coding Homo_sapiens 0 1448
ENST00000373206 AGO1-001 protein_coding Homo_sapiens 0 1448
ENST00000519980 AGO2-002 protein_coding Homo_sapiens 0 747
ENST00000523609 AGO2-003 nonsense_mediated_decay Homo_sapiens 0 1033

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