C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: si:ch211-117c9.5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000092131 si:ch211-117c9.5-001 ENSDARG00000071235 7955 + 23:6907022-6952736 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000092131
Transcript ID Brain Heart Kidney Muscle
ENSDART00000092131 14.949±9.78 4.499±0.00 1.989±0.00 0.395±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0006810 IEA transport
GO:0006836 IEA neurotransmitter transport
GO:0015293 IEA symporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253122 SLC6A8-002 protein_coding Homo_sapiens 9.99967e-42 176
ENST00000330048 SLC6A10P-002 processed_transcript Homo_sapiens 1e-21 110
ENST00000343164 SLC6A13-001 protein_coding Homo_sapiens 0.000000000002 79
ENST00000430077 SLC6A8-005 protein_coding Homo_sapiens 2e-27 128
ENST00000431994 SLC6A10P-001 transcribed_unprocessed_pseudogene Homo_sapiens 4.2039e-45 187
ENST00000445055 SLC6A13-201 protein_coding Homo_sapiens 0.000000000002 79
ENST00000466243 SLC6A8-010 processed_transcript Homo_sapiens 4e-24 115
ENST00000534887 SLC6A13-009 retained_intron Homo_sapiens 0.0000002 60
ENST00000536842 SLC6A13-008 retained_intron Homo_sapiens 0.0000004 60
ENST00000542379 SLC6A13-015 processed_transcript Homo_sapiens 0.00000001 64
ENST00000546319 SLC6A13-004 protein_coding Homo_sapiens 0.00000002 64
ENST00000561837 SLC6A10P-003 processed_transcript Homo_sapiens 2e-22 110
ENST00000568600 RP11-598D12.4-001 unprocessed_pseudogene Homo_sapiens 9e-27 126
ENST00000611339 AC136616.1-202 protein_coding Homo_sapiens 3e-27 128
ENST00000613216 AC136616.1-201 protein_coding Homo_sapiens 2.99878e-43 182

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