C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small G protein signaling modulator 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000092357 SGSM2-001 ENSDARG00000063307 7955 + 15:19505412-19605469 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000092357
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000092357 0.286±0.00 1.163±0.00 1.028±0.92 0.029±0.00 0.380±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0032313 IEA regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268989 SGSM2-002 protein_coding Homo_sapiens 0 499
ENST00000400358 SGSM1-001 protein_coding Homo_sapiens 0 472
ENST00000400359 SGSM1-004 protein_coding Homo_sapiens 0 472
ENST00000426855 SGSM2-001 protein_coding Homo_sapiens 0 499
ENST00000473458 SGSM1-002 retained_intron Homo_sapiens 0 472
ENST00000480523 SGSM1-003 retained_intron Homo_sapiens 0 472
ENST00000572841 SGSM2-008 retained_intron Homo_sapiens 0 453
ENST00000572925 SGSM2-013 protein_coding Homo_sapiens 0.00000002 64
ENST00000573851 SGSM2-012 protein_coding Homo_sapiens 0 206
ENST00000574563 SGSM2-003 protein_coding Homo_sapiens 0 457
ENST00000610372 SGSM1-201 protein_coding Homo_sapiens 0 472

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