C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal transduction and activation of transcription 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000104519 stat3-001 ENSDARG00000022712 7955 + 3:16650646-16727426 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverENSDART00000104519
Transcript ID Heart Kidney Liver
ENSDART00000104519 15.251±3.14 30.317±0.00 2.044±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001736 IMP establishment of planar polarity
GO:0001837 IMP epithelial to mesenchymal transition
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005622 IMP intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007165 IEA signal transduction
GO:0007259 IMP JAK-STAT cascade
GO:0008045 IMP motor neuron axon guidance
GO:0030010 IMP establishment of cell polarity
GO:0042074 IMP cell migration involved in gastrulation
GO:0060042 IMP retina morphogenesis in camera-type eye
GO:0060252 IMP positive regulation of glial cell proliferation
GO:0061026 IMP cardiac muscle tissue regeneration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092671 Stat3-010 protein_coding Mus_musculus 0 1530
ENSMUST00000103114 Stat3-002 protein_coding Mus_musculus 0 1530
ENSMUST00000127638 Stat3-001 protein_coding Mus_musculus 0 1530
ENSMUST00000138438 Stat3-011 protein_coding Mus_musculus 0 1247
ENSMUST00000146971 Stat3-006 retained_intron Mus_musculus 4e-20 104
ENSMUST00000151544 Stat3-008 retained_intron Mus_musculus 4e-38 161
ENSMUST00000156645 Stat3-003 processed_transcript Mus_musculus 0 462
ENST00000264657 STAT3-001 protein_coding Homo_sapiens 0 1467
ENST00000389272 STAT3-013 protein_coding Homo_sapiens 0 1360
ENST00000404395 STAT3-002 protein_coding Homo_sapiens 0 1467
ENST00000471989 STAT3-005 retained_intron Homo_sapiens 0 241
ENST00000498330 STAT3-004 retained_intron Homo_sapiens 0 357
ENST00000585517 STAT3-012 protein_coding Homo_sapiens 0 1467
ENST00000588969 STAT3-011 protein_coding Homo_sapiens 0 1467

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