C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal transducer and activator of transcription 3 (acute-phase response factor)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389272 STAT3-013 ENSG00000168610 9606 - 17:42315468-42388431 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000389272
Transcript ID Brain
ENST00000389272 1.299±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IK CIL_0006IK_0001 CGP 17:42287547-42388568
CIL_00046I CIL_00046I_0001 CGP 17:42313324-42423517

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005634 IDA:IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127638 Stat3-001 protein_coding Mus_musculus 0 3201
ENSMUST00000092671 Stat3-010 protein_coding Mus_musculus 0 3188
ENSMUST00000138438 Stat3-011 protein_coding Mus_musculus 0 2750
ENSMUST00000103114 Stat3-002 protein_coding Mus_musculus 0 2741
ENSDART00000080854 stat3-002 protein_coding Danio_rerio 0 1360
ENSDART00000104519 stat3-001 protein_coding Danio_rerio 0 1360
ENSMUST00000154170 Stat3-005 retained_intron Mus_musculus 0 765
ENSMUST00000156645 Stat3-003 processed_transcript Mus_musculus 0 756
ENSMUST00000152601 Stat3-013 retained_intron Mus_musculus 0 556
ENSMUST00000137093 Stat3-014 retained_intron Mus_musculus 0 527
ENSMUST00000155972 Stat3-009 retained_intron Mus_musculus 0 457
ENSMUST00000137367 Stat3-007 retained_intron Mus_musculus 0 401
ENSMUST00000130686 Stat3-004 retained_intron Mus_musculus 0 307
ENSMUST00000146971 Stat3-006 retained_intron Mus_musculus 0 196
ENSMUST00000152623 Stat3-012 retained_intron Mus_musculus 2e-34 152
ENSMUST00000189347 Stat1-008 protein_coding Mus_musculus 2e-28 132
ENSMUST00000186857 Stat1-006 protein_coding Mus_musculus 2e-28 132
ENSMUST00000191435 Stat1-007 protein_coding Mus_musculus 2e-28 132
ENSMUST00000070968 Stat1-001 protein_coding Mus_musculus 2e-28 132
ENSMUST00000186574 Stat1-004 protein_coding Mus_musculus 2e-28 132
ENSMUST00000186057 Stat1-009 protein_coding Mus_musculus 4e-16 92

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