C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CCHC-type zinc finger, nucleic acid binding protein b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000104520 cnbpb-001 ENSDARG00000070922 7955 - 11:478773-484619 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000104520
Transcript ID Brain Heart Liver Muscle
ENSDART00000104520 56.923±39.84 155.183±0.00 11.242±0.00 142.000±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007J CIL_00007J_0001 CGP 11:461198-484619

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032138 Cnbp-201 protein_coding Mus_musculus 0 492
ENSMUST00000113619 Cnbp-001 protein_coding Mus_musculus 0 494
ENSMUST00000141961 Cnbp-004 retained_intron Mus_musculus 0 287
ENST00000422453 CNBP-001 protein_coding Homo_sapiens 0 514
ENST00000441626 CNBP-009 protein_coding Homo_sapiens 0 503
ENST00000446936 CNBP-011 protein_coding Homo_sapiens 0 503
ENST00000451728 CNBP-010 protein_coding Homo_sapiens 0 510
ENST00000500450 CNBP-004 protein_coding Homo_sapiens 0 514
ENST00000502372 CNBP-006 retained_intron Homo_sapiens 0 438
ENST00000502976 CNBP-002 protein_coding Homo_sapiens 0 514
ENST00000504813 CNBP-003 protein_coding Homo_sapiens 0 514

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