C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cellular nucleic acid binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141961 Cnbp-004 ENSMUSG00000030057 10090 - 6:87843919-87851027 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungTestisENSMUST00000141961
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Testis
ENSMUST00000141961 43.601±3.83 25.676±1.70 26.223±0.00 35.626±10.14 27.970±8.26 31.807±0.45 44.579±2.89 26.722±5.37 36.739±4.41 7.338±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007J CIL_00007J_0003 CGP 6:87818447-87851106
CIL_000312 CIL_000312_0002 CGP 6:87842615-87913595

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000154888 cnbpb-002 protein_coding Danio_rerio 0 287
ENSDART00000104520 cnbpb-001 protein_coding Danio_rerio 0 287
ENST00000422453 CNBP-001 protein_coding Homo_sapiens 0 726
ENST00000441626 CNBP-009 protein_coding Homo_sapiens 0 739
ENST00000446936 CNBP-011 protein_coding Homo_sapiens 0 739
ENST00000451728 CNBP-010 protein_coding Homo_sapiens 0 734
ENST00000500450 CNBP-004 protein_coding Homo_sapiens 0 726
ENST00000502372 CNBP-006 retained_intron Homo_sapiens 0 994
ENST00000502976 CNBP-002 protein_coding Homo_sapiens 0 726
ENST00000504813 CNBP-003 protein_coding Homo_sapiens 0 726
ENST00000507573 CNBP-005 retained_intron Homo_sapiens 0 274
ENST00000512338 CNBP-008 protein_coding Homo_sapiens 0 405

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