C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, beta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000108535 GABRB1-201 ENSDARG00000076127 7955 + 13:12169585-12244750 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000108535
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000108535 3.960±0.48 0.023±0.01 0.114±0.03 0.022±0.00 0.107±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LI CIL_0005LI_0001 CGP 13:12169585-12258905

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018739 Glra4-001 protein_coding Mus_musculus 0.000000004 68
ENSMUST00000154833 Glra4-002 retained_intron Mus_musculus 0.000000004 68
ENST00000372617 GLRA4-001 protein_coding Homo_sapiens 0.00000000000004 84
ENST00000480725 GLRA4-004 retained_intron Homo_sapiens 0.00000000000004 84

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