C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, kainate 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000109264 GRIK2 (1 of 2)-201 ENSDARG00000074515 7955 + 16:2688827-2912494 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000109264
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000109264 3.928±2.76 0.019±0.00 0.068±0.00 0.014±0.00 0.386±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004970 IEA ionotropic glutamate receptor activity
GO:0005215 IEA transporter activity
GO:0005234 IEA extracellular-glutamate-gated ion channel activity
GO:0006810 IEA transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023652 Grik1-201 protein_coding Mus_musculus 0 989
ENSMUST00000072256 Grik1-202 protein_coding Mus_musculus 0 989
ENSMUST00000079751 Grik2-201 protein_coding Mus_musculus 0 1469
ENSMUST00000105484 Grik2-202 protein_coding Mus_musculus 0 1578
ENSMUST00000105485 Grik2-004 protein_coding Mus_musculus 0 1469
ENSMUST00000105486 Grik2-005 protein_coding Mus_musculus 0 1471
ENSMUST00000105487 Grik2-001 protein_coding Mus_musculus 0 1578
ENSMUST00000114137 Grik1-203 protein_coding Mus_musculus 0 989
ENSMUST00000147808 Grik2-003 retained_intron Mus_musculus 0 621
ENST00000309434 GRIK1-201 protein_coding Homo_sapiens 0 778
ENST00000327783 GRIK1-004 protein_coding Homo_sapiens 0 778
ENST00000389124 GRIK1-005 protein_coding Homo_sapiens 0 778
ENST00000389125 GRIK1-001 protein_coding Homo_sapiens 0 966
ENST00000399907 GRIK1-002 protein_coding Homo_sapiens 0 778
ENST00000399909 GRIK1-008 protein_coding Homo_sapiens 0 966
ENST00000399913 GRIK1-006 protein_coding Homo_sapiens 0 778
ENST00000399914 GRIK1-003 protein_coding Homo_sapiens 0 966
ENST00000535441 GRIK1-202 protein_coding Homo_sapiens 0 966

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