C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: structural maintenance of chromosomes 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000109416 smc2-001 ENSDARG00000017744 7955 + 1:18280194-18303696 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000109416
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000109416 0.510±0.40 0.713±0.55 23.760±5.39 0.322±0.00 0.353±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000796 IEA condensin complex
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0007076 IEA mitotic chromosome condensation
GO:0051276 IEA chromosome organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102915 Smc2-001 protein_coding Mus_musculus 0 322
ENSMUST00000117280 Smc2-002 protein_coding Mus_musculus 0 322
ENSMUST00000131163 Smc2-004 processed_transcript Mus_musculus 0 250
ENSMUST00000142227 Smc2-003 protein_coding Mus_musculus 0 322
ENST00000286398 SMC2-201 protein_coding Homo_sapiens 0 348
ENST00000374787 SMC2-002 protein_coding Homo_sapiens 0 348
ENST00000374793 SMC2-001 protein_coding Homo_sapiens 0 348
ENST00000440179 SMC2-004 protein_coding Homo_sapiens 0 200

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