C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: structural maintenance of chromosomes 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131163 Smc2-004 ENSMUSG00000028312 10090 + 4:52439252-52447776 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungTestisENSMUST00000131163
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Testis
ENSMUST00000131163 1.567±0.97 0.929±0.00 0.954±0.05 1.116±0.24 0.234±0.00 0.743±0.00 0.898±0.00 5.941±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QK CIL_0001QK_0002 CGP 4:51216678-52488260

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000109416 smc2-001 protein_coding Danio_rerio 0 250
ENSDART00000008616 smc2-201 protein_coding Danio_rerio 0 244
ENST00000286398 SMC2-201 protein_coding Homo_sapiens 0 680
ENST00000374787 SMC2-002 protein_coding Homo_sapiens 0 680
ENST00000374793 SMC2-001 protein_coding Homo_sapiens 0 680
ENST00000440179 SMC2-004 protein_coding Homo_sapiens 0 235

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