C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: structural maintenance of chromosomes 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142227 Smc2-003 ENSMUSG00000028312 10090 + 4:52439269-52458574 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryENSMUST00000142227
Transcript ID Muscle Ovary
ENSMUST00000142227 0.094±0.00 0.980±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QK CIL_0001QK_0002 CGP 4:51216678-52488260

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000793 IDA condensed chromosome
GO:0000796 IEA condensin complex
GO:0007076 IEA mitotic chromosome condensation
GO:0010032 IMP meiotic chromosome condensation
GO:0045132 IMP meiotic chromosome segregation
GO:0051383 IMP kinetochore organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000109416 smc2-001 protein_coding Danio_rerio 0 322
ENSDART00000008616 smc2-201 protein_coding Danio_rerio 0 316
ENST00000286398 SMC2-201 protein_coding Homo_sapiens 0 1762
ENST00000374787 SMC2-002 protein_coding Homo_sapiens 0 1762
ENST00000374793 SMC2-001 protein_coding Homo_sapiens 0 1762
ENST00000440179 SMC2-004 protein_coding Homo_sapiens 0 701

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