C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000110061 spock2-201 ENSDARG00000075393 7955 + 13:30278814-30357267 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000110061
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000110061 130.860±85.36 0.058±0.03 1.143±0.11 0.042±0.00 1.281±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121820 Spock2-001 protein_coding Mus_musculus 0 429
ENSMUST00000138976 Spock2-002 retained_intron Mus_musculus 0 254
ENSMUST00000165024 Spock2-201 protein_coding Mus_musculus 0 418
ENST00000317376 SPOCK2-201 protein_coding Homo_sapiens 0 442
ENST00000373109 SPOCK2-004 protein_coding Homo_sapiens 0 442
ENST00000460053 SPOCK2-006 processed_transcript Homo_sapiens 0 274
ENST00000463279 SPOCK2-002 processed_transcript Homo_sapiens 0 320
ENST00000469121 SPOCK2-001 processed_transcript Homo_sapiens 0 274
ENST00000513481 RP11-326I11.1-001 processed_pseudogene Homo_sapiens 0.0000008 58
ENST00000536168 SPOCK2-203 protein_coding Homo_sapiens 0 451

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