C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138976 Spock2-002 ENSMUSG00000058297 10090 + 10:60106219-60127338 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000138976
Transcript ID Adrenal Ovary
ENSMUST00000138976 4.354±0.00 13.558±0.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VS CIL_0007VS_0002 VISTA 10:59667734-60271225

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000132027 spock2-001 protein_coding Danio_rerio 0 267
ENSDART00000110061 spock2-201 protein_coding Danio_rerio 0 254
ENST00000317376 SPOCK2-201 protein_coding Homo_sapiens 0 1456
ENST00000373109 SPOCK2-004 protein_coding Homo_sapiens 0 1456
ENST00000412663 SPOCK2-202 protein_coding Homo_sapiens 0 582
ENST00000495888 SPOCK2-005 processed_transcript Homo_sapiens 0 496
ENST00000536168 SPOCK2-203 protein_coding Homo_sapiens 0 1360

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