C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: hect domain and RLD 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000110770 herc2-201 ENSDARG00000073841 7955 + 6:37703111-37798075 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000110770
Transcript ID Brain Heart Kidney
ENSDART00000110770 6.511±0.00 3.122±1.39 3.307±1.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000391 CIL_000391_0001 CGP 6:37694067-37798075
CIL_0006LG CIL_0006LG_0001 CGP 6:37701129-37985706

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein ligase activity
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0020037 IEA heme binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076226 Herc2-201 protein_coding Mus_musculus 0 4518
ENSMUST00000164095 Herc2-202 protein_coding Mus_musculus 0 4518
ENST00000261609 HERC2-001 protein_coding Homo_sapiens 0 2608
ENST00000562136 HERC2-008 retained_intron Homo_sapiens 0 514
ENST00000566635 HERC2-006 retained_intron Homo_sapiens 0 905
ENST00000620983 AC243653.1-201 protein_coding Homo_sapiens 0 905

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