C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: crooked neck pre-mRNA splicing factor-like 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000112689 crnkl1-201 ENSDARG00000007901 7955 + 20:49386886-49408359 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000112689
Transcript ID Brain Heart Liver Muscle
ENSDART00000112689 5.437±0.00 8.794±0.00 1.620±0.00 4.957±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006396 IEA RNA processing
GO:0006397 IEA mRNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001818 Crnkl1-001 protein_coding Mus_musculus 0 1107
ENST00000377327 CRNKL1-001 protein_coding Homo_sapiens 0 977
ENST00000377340 CRNKL1-002 protein_coding Homo_sapiens 0 977
ENST00000490910 CRNKL1-003 nonsense_mediated_decay Homo_sapiens 0 948
ENST00000496549 CRNKL1-004 nonsense_mediated_decay Homo_sapiens 0 942
ENST00000536226 CRNKL1-007 protein_coding Homo_sapiens 0 977

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