C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sidekick cell adhesion molecule 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000113318 SDK2 (2 of 2)-201 ENSDARG00000078116 7955 + 3:47784138-47892607 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSDART00000113318
Transcript ID Muscle
ENSDART00000113318 0.021±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074546 Sdk1-002 protein_coding Mus_musculus 0 311
ENSMUST00000085774 Sdk1-001 protein_coding Mus_musculus 0 311
ENST00000392650 SDK2-002 protein_coding Homo_sapiens 0 2213
ENST00000410094 SDK2-006 processed_transcript Homo_sapiens 0 579
ENST00000424778 SDK2-004 protein_coding Homo_sapiens 0 907
ENST00000479356 SDK2-001 retained_intron Homo_sapiens 0 1860

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