C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, kainate 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000594528 GRIK5-005 ENSG00000105737 9606 - 19:42021331-42065805 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungMusclePlacentaENST00000594528
Transcript ID Liver Lung Muscle Placenta
ENST00000594528 0.172±0.00 0.272±0.00 0.034±0.00 0.030±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YN CIL_0003YN_0001 CGP 19:41966582-42069498
CIL_0003XZ CIL_0003XZ_0001 CGP 19:41998321-42081565

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003468 Grik5-201 protein_coding Mus_musculus 0 2242
ENSDART00000114472 GRIK5 (2 of 2)-201 protein_coding Danio_rerio 0 793
ENSDART00000122055 grik5-202 protein_coding Danio_rerio 0 765
ENSDART00000114766 grik5-201 protein_coding Danio_rerio 0 760

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