C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ras homolog gene family, member Q
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024956 Rhoq-001 ENSMUSG00000024143 10090 + 17:86963082-87000069 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024956
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024956 44.454±2.93 24.597±1.43 13.092±6.88 5.561±1.08 36.696±4.33 14.769±1.19 34.426±1.85 14.205±1.22 1.882±0.78 16.503±2.87 30.676±11.18 15.924±4.24 4.459±1.57 1.578±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NS CIL_0001NS_0002 CGP 17:86944109-87000069
CIL_0001ND CIL_0001ND_0002 CGP 17:86963082-87025406

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 TAS GTPase activity
GO:0005515 IPI protein binding
GO:0005522 IEA profilin binding
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005884 IEA actin filament
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008286 IEA insulin receptor signaling pathway
GO:0008360 IDA regulation of cell shape
GO:0030036 TAS actin cytoskeleton organization
GO:0030866 IMP cortical actin cytoskeleton organization
GO:0032427 IEA GBD domain binding
GO:0032869 IMP cellular response to insulin stimulus
GO:0045121 IDA membrane raft
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046325 IC negative regulation of glucose import
GO:0046326 IEA positive regulation of glucose import
GO:0051491 IEA positive regulation of filopodium assembly
GO:0070062 IEA extracellular vesicular exosome
GO:0090005 IDA negative regulation of establishment of protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000044690 rac3b-201 protein_coding Danio_rerio 0.0000000000003 82
ENSDART00000122905 rac3b-001 protein_coding Danio_rerio 0.0000000000003 82
ENST00000238738 RHOQ-001 protein_coding Homo_sapiens 0 2156
ENST00000281382 PIGF-001 protein_coding Homo_sapiens 0 749
ENST00000306465 PIGF-002 protein_coding Homo_sapiens 0 359
ENST00000412717 PIGF-004 nonsense_mediated_decay Homo_sapiens 0 211
ENST00000420164 PIGF-007 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000432183 RHOQ-003 nonsense_mediated_decay Homo_sapiens 0 621
ENST00000437982 RHOQP3-001 processed_pseudogene Homo_sapiens 0 881
ENST00000449922 RHOQP2-001 processed_pseudogene Homo_sapiens 0 828
ENST00000473428 RHOQ-007 nonsense_mediated_decay Homo_sapiens 0 817
ENST00000482449 RHOQ-002 protein_coding Homo_sapiens 0 455
ENST00000482786 PIGF-005 processed_transcript Homo_sapiens 0 359
ENST00000489448 RHOQ-008 retained_intron Homo_sapiens 0 195
ENST00000489471 RHOQ-006 nonsense_mediated_decay Homo_sapiens 0 739
ENST00000494370 RHOQ-005 retained_intron Homo_sapiens 0 300
ENST00000555758 RHOQP1-001 processed_pseudogene Homo_sapiens 0 845
ENST00000557531 LRR1-005 processed_transcript Homo_sapiens 0 411
ENST00000614802 RP11-649E7.8-001 unprocessed_pseudogene Homo_sapiens 4e-37 156
ENST00000616091 RHOQ-201 protein_coding Homo_sapiens 0 966

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