C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calcium channel, voltage-dependent, T type, alpha 1G subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000123534 cacna1g-201 ENSDARG00000089913 7955 + 12:29276263-29637717 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleENSDART00000123534
Transcript ID Brain Heart Muscle
ENSDART00000123534 4.861±2.42 6.490±2.07 0.482±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X2 CIL_0004X2_0001 CGP 12:29160638-29637717

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0005245 IEA voltage-gated calcium channel activity
GO:0005262 IEA calcium channel activity
GO:0005891 IEA voltage-gated calcium channel complex
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006816 IEA calcium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0055085 IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021234 Cacna1g-201 protein_coding Mus_musculus 0 697
ENSMUST00000078496 Cacna1h-201 protein_coding Mus_musculus 0 300
ENSMUST00000100561 Cacna1g-005 protein_coding Mus_musculus 0 697
ENSMUST00000103166 Cacna1g-003 protein_coding Mus_musculus 0 1208
ENSMUST00000107785 Cacna1g-006 protein_coding Mus_musculus 0 697
ENSMUST00000107786 Cacna1g-001 protein_coding Mus_musculus 0 1208
ENSMUST00000107788 Cacna1g-009 protein_coding Mus_musculus 0 697
ENSMUST00000107789 Cacna1g-011 protein_coding Mus_musculus 0 1208
ENSMUST00000107790 Cacna1g-010 protein_coding Mus_musculus 0 1208
ENSMUST00000107791 Cacna1g-002 protein_coding Mus_musculus 0 697
ENSMUST00000107792 Cacna1g-004 protein_coding Mus_musculus 0 697
ENSMUST00000107793 Cacna1g-008 protein_coding Mus_musculus 0 697
ENSMUST00000152811 Cacna1g-007 processed_transcript Mus_musculus 0 462
ENSMUST00000159048 Cacna1h-002 protein_coding Mus_musculus 0 300
ENSMUST00000159610 Cacna1h-001 protein_coding Mus_musculus 0 300
ENSMUST00000161454 Cacna1h-004 retained_intron Mus_musculus 0 300
ENST00000401624 CACNA1I-003 protein_coding Homo_sapiens 0 435
ENST00000402142 CACNA1I-001 protein_coding Homo_sapiens 0 435
ENST00000404898 CACNA1I-002 protein_coding Homo_sapiens 0 435
ENST00000407673 CACNA1I-004 protein_coding Homo_sapiens 0 435

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