C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: U2 small nuclear RNA auxiliary factor 2a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000124875 u2af2a-201 ENSDARG00000012505 7955 + 16:14564328-14573413 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000124875
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000124875 11.233±3.91 4.218±2.68 4.364±0.00 0.667±0.00 2.171±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0046660 IEA female sex differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005041 U2af2-201 protein_coding Mus_musculus 0 767
ENSMUST00000165399 U2af2-202 protein_coding Mus_musculus 0 608
ENST00000308924 U2AF2-002 protein_coding Homo_sapiens 0 730
ENST00000450554 U2AF2-001 protein_coding Homo_sapiens 0 769
ENST00000587275 U2AF2-009 retained_intron Homo_sapiens 0 196
ENST00000590551 U2AF2-008 protein_coding Homo_sapiens 0 568
ENST00000592874 U2AF2-007 nonsense_mediated_decay Homo_sapiens 0 289

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