C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000125104 agap2-202 ENSDARG00000061117 7955 - 23:36721271-36770524 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyMuscleENSDART00000125104
Transcript ID Brain Kidney Muscle
ENSDART00000125104 22.282±0.00 0.214±0.00 0.277±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033O CIL_00033O_0001 CGP 23:36543111-36786781
CIL_0002KQ CIL_0002KQ_0001 CGP 23:36721271-36846030

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0032312 IEA regulation of ARF GTPase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024123 Agap3-201 protein_coding Mus_musculus 0.000004 58
ENST00000397238 AGAP3-001 protein_coding Homo_sapiens 0.00006 55
ENST00000463381 AGAP3-002 protein_coding Homo_sapiens 0.00005 55
ENST00000478320 AGAP3-023 processed_transcript Homo_sapiens 0.00001 55
ENST00000483971 AGAP3-024 processed_transcript Homo_sapiens 0.000005 55
ENST00000485904 AGAP3-021 processed_transcript Homo_sapiens 0.00001 55
ENST00000494808 AGAP3-022 retained_intron Homo_sapiens 0.000008 55
ENST00000622464 AGAP3-201 protein_coding Homo_sapiens 0.00006 55

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