C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA (cytosine-5-)-methyltransferase 3 alpha b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000126823 dnmt3ab-001 ENSDARG00000015566 7955 - 17:37108385-37156049 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JL CIL_0003JL_0001 CGP 17:37107098-37324038

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0006306 IEA DNA methylation
GO:0008168 IEA methyltransferase activity
GO:0016740 IEA transferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020991 Dnmt3a-001 protein_coding Mus_musculus 0 1046
ENSMUST00000111186 Dnmt3a-201 protein_coding Mus_musculus 0 1046
ENSMUST00000172689 Dnmt3a-005 protein_coding Mus_musculus 0 1046
ENSMUST00000174483 Dnmt3a-004 nonsense_mediated_decay Mus_musculus 0 1046
ENSMUST00000174817 Dnmt3a-006 protein_coding Mus_musculus 0 1046
ENST00000264709 DNMT3A-001 protein_coding Homo_sapiens 0 1064
ENST00000321117 DNMT3A-011 protein_coding Homo_sapiens 0 1064
ENST00000380746 DNMT3A-002 protein_coding Homo_sapiens 0 1064
ENST00000380756 DNMT3A-010 nonsense_mediated_decay Homo_sapiens 0 739
ENST00000402667 DNMT3A-013 protein_coding Homo_sapiens 0 1064
ENST00000461228 DNMT3A-006 processed_transcript Homo_sapiens 0 291
ENST00000466601 DNMT3A-007 retained_intron Homo_sapiens 0 327
ENST00000474887 DNMT3A-008 processed_transcript Homo_sapiens 0 418
ENST00000482935 DNMT3A-015 processed_transcript Homo_sapiens 0 315

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