| Transcript ID | Bladder | Breast | Ovary |
|---|---|---|---|
| ENST00000421364 | 1.465±0.00 | 2.468±0.00 | 1.901±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | AT rich interactive domain 4B (RBP1-like) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000421364  |
ARID4B-010 |
ENSG00000054267 |
9606 | - |
1:235167884-235328134  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006KF | CIL_0006KF_0001 | CGP | 1:235109336-235161457 |
| CIL_0000L1 | CIL_0000L1_0002 | CGP | 1:235131634-235344532 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0003677 | IEA | DNA binding |
| GO:0005515 | IPI | protein binding |
| GO:0005575 | ND | cellular_component |
| GO:0005622 | IEA | intracellular |
| GO:0005634 | IEA | nucleus |
| GO:0005737 | IEA | cytoplasm |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0008150 | ND | biological_process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000110534
|
Arid4b-001 | protein_coding | Mus_musculus | 0 | 4348 |
|
ENSMUST00000110536
|
Arid4b-004 | protein_coding | Mus_musculus | 0 | 2302 |
|
ENSMUST00000129488
|
Arid4b-002 | protein_coding | Mus_musculus | 0 | 2122 |
|
ENSMUST00000039538
|
Arid4b-201 | protein_coding | Mus_musculus | 0 | 2058 |
|
ENSMUST00000110533
|
Arid4b-003 | protein_coding | Mus_musculus | 0 | 1951 |
|
ENSMUST00000149579
|
Arid4b-006 | protein_coding | Mus_musculus | 0 | 1890 |
|
ENSMUST00000148941
|
Arid4b-005 | processed_transcript | Mus_musculus | 0 | 1845 |
|
ENSMUST00000151151
|
Arid4b-009 | processed_transcript | Mus_musculus | 0 | 952 |
|
ENSMUST00000155553
|
Arid4b-007 | processed_transcript | Mus_musculus | 0 | 248 |
|
ENSDART00000128291
|
arid4a-201 | protein_coding | Danio_rerio | 1.99993e-41 | 176 |
|
ENSDART00000103228
|
arid4a-002 | protein_coding | Danio_rerio | 1.99993e-41 | 176 |
|
ENSDART00000064412
|
arid4a-001 | protein_coding | Danio_rerio | 1.99993e-41 | 176 |
|
ENSDART00000151847
|
arid4a-003 | protein_coding | Danio_rerio | 1.99993e-41 | 176 |
|
ENSMUST00000151182
|
Arid4b-008 | processed_transcript | Mus_musculus | 3e-34 | 152 |
|
ENSDART00000130175
|
AP3B1 (1 of 2)-201 | protein_coding | Danio_rerio | 0.00005 | 55 |
