C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: casein kinase 1, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170862 Csnk1a1-007 ENSMUSG00000024576 10090 + 18:61555339-61588182 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonLiverLungMuscleOvaryENSMUST00000170862
Transcript ID Adipose Colon Liver Lung Muscle Ovary
ENSMUST00000170862 17.088±6.28 10.865±0.73 4.725±0.00 14.547±3.20 15.365±1.15 17.781±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000851 CIL_000851_0002 VISTA 18:61337492-61938739
CIL_0007ZC CIL_0007ZC_0002 VISTA 18:61351102-61954077

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IGI cell morphogenesis
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0030529 IDA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000121429 csnk1a1-203 protein_coding Danio_rerio 0 1116
ENSDART00000009443 csnk1a1-201 protein_coding Danio_rerio 0 1116
ENSDART00000130655 csnk1a1-204 protein_coding Danio_rerio 0 621
ENSDART00000052520 csnk1a1-202 protein_coding Danio_rerio 0 621
ENST00000261798 CSNK1A1-001 protein_coding Homo_sapiens 0 1020
ENST00000377843 CSNK1A1-201 protein_coding Homo_sapiens 0 1919
ENST00000379800 CSNK1A1L-001 protein_coding Homo_sapiens 0 1299
ENST00000412431 CSNK1A1-202 protein_coding Homo_sapiens 0 822
ENST00000430593 CSNK1A1P1-002 processed_transcript Homo_sapiens 0 401
ENST00000503350 CSNK1A1-006 protein_coding Homo_sapiens 0 809
ENST00000504105 CSNK1A1P3-001 processed_pseudogene Homo_sapiens 0 318
ENST00000504676 CSNK1A1-002 protein_coding Homo_sapiens 0 1020
ENST00000515435 CSNK1A1-004 protein_coding Homo_sapiens 0 1515
ENST00000515748 CSNK1A1-005 protein_coding Homo_sapiens 0 396
ENST00000515768 CSNK1A1-003 protein_coding Homo_sapiens 0 1740
ENST00000523203 CSNK1A1-007 nonsense_mediated_decay Homo_sapiens 0 497
ENST00000546014 AP000619.6-001 processed_pseudogene Homo_sapiens 0 571
ENST00000563423 CSNK1A1P1-001 transcribed_processed_pseudogene Homo_sapiens 0 689
ENST00000606299 CSNK1A1-009 protein_coding Homo_sapiens 0 544
ENST00000606719 CSNK1A1-008 protein_coding Homo_sapiens 0 1247
ENST00000606826 CSNK1A1-010 nonsense_mediated_decay Homo_sapiens 0 737

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