C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4A, isoform 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000130781 eif4a2-001 ENSDARG00000016477 7955 + 2:7500004-7511589 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000130781
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000130781 26.609±23.57 40.361±10.87 18.543±0.00 6.146±0.00 49.584±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003743 IEA translation initiation factor activity
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0006412 IEA translation
GO:0006413 IEA translational initiation
GO:0008026 IEA ATP-dependent helicase activity
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023599 Eif4a2-001 protein_coding Mus_musculus 0 845
ENSMUST00000077605 Eif4a2-002 protein_coding Mus_musculus 0 715
ENSMUST00000115341 Eif4a2-014 protein_coding Mus_musculus 0 845
ENSMUST00000123413 Eif4a2-003 nonsense_mediated_decay Mus_musculus 0 715
ENSMUST00000130113 Eif4a2-008 retained_intron Mus_musculus 2e-34 150
ENSMUST00000130483 Eif4a2-018 retained_intron Mus_musculus 1e-34 150
ENSMUST00000130775 Eif4a2-007 retained_intron Mus_musculus 0 224
ENSMUST00000131871 Eif4a2-006 nonsense_mediated_decay Mus_musculus 4e-34 150
ENSMUST00000135020 Eif4a2-015 retained_intron Mus_musculus 0 237
ENSMUST00000140017 Eif4a2-017 retained_intron Mus_musculus 2e-34 150
ENSMUST00000141392 Eif4a2-012 retained_intron Mus_musculus 8e-36 154
ENSMUST00000142031 Eif4a2-009 processed_transcript Mus_musculus 1e-34 150
ENSMUST00000147117 Eif4a2-005 nonsense_mediated_decay Mus_musculus 4e-34 150
ENSMUST00000149328 Eif4a2-013 retained_intron Mus_musculus 9e-36 154
ENSMUST00000168891 Eif4a2-201 protein_coding Mus_musculus 5e-34 150
ENSMUST00000187168 Eif4a2-202 protein_coding Mus_musculus 0 715
ENST00000269349 EIF4A3-001 protein_coding Homo_sapiens 0.0000000000001 82
ENST00000323963 EIF4A2-001 protein_coding Homo_sapiens 0 867
ENST00000425053 EIF4A2-003 nonsense_mediated_decay Homo_sapiens 0 732
ENST00000426808 EIF4A2-002 nonsense_mediated_decay Homo_sapiens 8.00001e-41 172
ENST00000429589 EIF4A2-016 nonsense_mediated_decay Homo_sapiens 4.99997e-41 172
ENST00000440191 EIF4A2-004 protein_coding Homo_sapiens 0 867
ENST00000441007 EIF4A2-008 protein_coding Homo_sapiens 1e-28 130
ENST00000443963 EIF4A2-005 nonsense_mediated_decay Homo_sapiens 8.00001e-41 172
ENST00000445596 EIF4A2-009 protein_coding Homo_sapiens 0 248
ENST00000455776 EIF4A2P2-001 processed_pseudogene Homo_sapiens 2e-19 100
ENST00000465032 EIF4A2-013 retained_intron Homo_sapiens 0 259
ENST00000465267 EIF4A2-014 retained_intron Homo_sapiens 0 259
ENST00000467585 EIF4A2-019 retained_intron Homo_sapiens 3.00004e-41 172
ENST00000475653 EIF4A2-017 retained_intron Homo_sapiens 4.00001e-41 172
ENST00000485101 EIF4A2-006 retained_intron Homo_sapiens 1.99993e-41 176
ENST00000486805 EIF4A2-012 retained_intron Homo_sapiens 1.99965e-42 176
ENST00000495049 EIF4A2-015 retained_intron Homo_sapiens 3.00004e-41 172
ENST00000498746 EIF4A2-018 protein_coding Homo_sapiens 0 274
ENST00000570837 EIF4A3-006 retained_intron Homo_sapiens 0.000000004 66
ENST00000576547 EIF4A3-005 protein_coding Homo_sapiens 0.000000004 66

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