C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: iroquois homeobox protein 1, b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000130922 irx1b-201 ENSDARG00000056594 7955 - 19:28613322-28616331 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000130922
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000130922 3.437±0.13 1.867±0.00 0.908±0.77 0.024±0.00 0.037±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034185 Irx6-001 protein_coding Mus_musculus 2.99878e-43 182
ENSMUST00000093312 Irx3-002 protein_coding Mus_musculus 0 191
ENSMUST00000167261 Irx6-002 protein_coding Mus_musculus 2.00386e-43 182
ENSMUST00000175795 Irx3-001 protein_coding Mus_musculus 0 191
ENST00000290552 IRX6-001 protein_coding Homo_sapiens 9e-38 163
ENST00000320990 IRX5-002 protein_coding Homo_sapiens 5e-39 167
ENST00000329734 IRX3-001 protein_coding Homo_sapiens 0 207
ENST00000394636 IRX5-001 protein_coding Homo_sapiens 5e-39 167
ENST00000558180 IRX3-002 retained_intron Homo_sapiens 0 207
ENST00000558315 IRX6-002 processed_transcript Homo_sapiens 1e-35 154
ENST00000558597 IRX5-004 protein_coding Homo_sapiens 4e-39 167

Loading