C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor subfamily 2, group F, member 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000133384 nr2f1a-001 ENSDARG00000052695 7955 + 5:51527504-51534340 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000133384
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000133384 18.300±10.15 4.498±2.67 2.294±0.49 0.629±0.00 2.581±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007N1 CIL_0007N1_0006 UCNEbase 5:50855383-52258751
CIL_0005KH CIL_0005KH_0001 CGP 5:51527504-51821548

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0004879 IEA ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091458 Nr2f1-001 protein_coding Mus_musculus 0 1066
ENSMUST00000125176 Nr2f1-002 protein_coding Mus_musculus 0 758
ENSMUST00000127137 Nr2f1-004 protein_coding Mus_musculus 0 758
ENSMUST00000150498 Nr2f1-003 protein_coding Mus_musculus 0 758
ENST00000327111 NR2F1-001 protein_coding Homo_sapiens 0 1048
ENST00000502982 NR2F1-003 processed_transcript Homo_sapiens 0 448
ENST00000506162 NR2F1-005 processed_transcript Homo_sapiens 0 292
ENST00000512697 NR2F1-002 processed_transcript Homo_sapiens 0 377
ENST00000615873 NR2F1-201 protein_coding Homo_sapiens 0 1024

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