C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005KH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052695-ENSDARG00000052697 CGP 7955 5:51527504-51821548
GeneTranscriptPositionBiotype
ENSDARG00000052695 (nr2f1a)
nuclear receptor subfamily 2, group F, member 1a 		ENSDART00000133384 (nr2f1a-001) 51527504-51534340 protein_coding
ENSDARG00000052697 (fam172a)
family with sequence similarity 172, member A 		ENSDART00000074599 (fam172a-201) 51630356-51821548 protein_coding
ENSDART00000135954 (fam172a-001) 51551014-51733897 protein_coding
ENSDARG00000098045 (si:dkey-172f14.2)
si:dkey-172f14.2 		ENSDART00000155405 (si:dkey-172f14.2-001) 51538048-51556721 antisense
CIL_0005KH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175745-ENSG00000113391 CGP 9606 5:93583337-94111699
GeneTranscriptPositionBiotype
ENSG00000113391 (FAM172A)
family with sequence similarity 172, member A 		ENST00000395965 (FAM172A-001) 93618069-94111635 protein_coding
ENST00000502503 (FAM172A-002) 93621081-94111699 nonsense_mediated_decay
ENST00000504768 (FAM172A-008) 93910696-94074771 processed_transcript
ENST00000505869 (FAM172A-006) 93620691-94111648 protein_coding
ENST00000506398 (FAM172A-004) 93881311-94074771 retained_intron
ENST00000509163 (FAM172A-005) 93620929-94111676 protein_coding
ENST00000509739 (FAM172A-007) 93620883-94074720 protein_coding
ENST00000510445 (FAM172A-010) 93784195-93881601 retained_intron
ENST00000511139 (FAM172A-011) 93776158-93824254 retained_intron
ENSG00000175745 (NR2F1)
nuclear receptor subfamily 2, group F, member 1 		ENST00000327111 (NR2F1-001) 93583337-93594615 protein_coding
ENST00000502982 (NR2F1-003) 93587460-93588388 processed_transcript
ENST00000506162 (NR2F1-005) 93591973-93594143 processed_transcript
ENST00000512697 (NR2F1-002) 93587101-93588333 processed_transcript
ENST00000615873 (NR2F1-201) 93585024-93594072 protein_coding
ENSG00000237187 (NR2F1-AS1)
NR2F1 antisense RNA 1 		ENST00000503134 (NR2F1-AS1-002) 93543542-93581032 antisense
ENST00000504474 (NR2F1-AS1-004) 93541872-93581297 antisense
ENST00000507963 (NR2F1-AS1-003) 93553753-93581055 antisense
ENST00000510254 (NR2F1-AS1-005) 93411289-93581007 antisense
ENST00000513055 (NR2F1-AS1-001) 93553761-93585648 antisense
ENST00000606165 (NR2F1-AS1-012) 93411018-93423242 antisense
ENST00000606188 (NR2F1-AS1-015) 93411018-93438737 antisense
ENST00000606233 (NR2F1-AS1-010) 93409809-93581219 antisense
ENST00000606696 (NR2F1-AS1-011) 93541872-93581288 antisense
ENST00000606739 (NR2F1-AS1-009) 93411021-93570819 antisense
ENST00000607112 (NR2F1-AS1-013) 93411402-93422413 antisense
ENST00000607195 (NR2F1-AS1-014) 93411033-93422423 antisense
ENST00000607797 (NR2F1-AS1-008) 93409359-93570793 antisense
ENST00000607831 (NR2F1-AS1-006) 93411447-93571343 antisense
ENSG00000248483 (POU5F2)
POU domain class 5, transcription factor 2 		ENST00000510627 (POU5F2-001) 93740308-93741637 protein_coding
ENST00000606183 (POU5F2-002) 93734806-93741123 processed_transcript
ENSG00000249353 (NPM1P27)
nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 27 		ENST00000502784 (NPM1P27-001) 93682838-93683667 processed_pseudogene
ENSG00000251023 (RP11-549J18.1)
 ENST00000505668 (RP11-549J18.1-001) 93860669-93863825 sense_intronic
ENSG00000272406 (RP11-185E12.2)
 ENST00000606528 (RP11-185E12.2-001) 93741640-93743500 lincRNA
ENSG00000278905 (RP11-65F13.3)
 ENST00000623223 (RP11-65F13.3-001) 93600357-93603598 TEC

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005KH_0001ENSDARG00000052695ENSDART00000133384ENSDARG00000052697ENSDART00000074599ENSDART00000135954ENSDARG00000098045ENSDART00000155405CIL_0005KH_0002ENSG00000113391ENST00000395965ENST00000502503ENST00000504768ENST00000505869ENST00000506398ENST00000509163ENST00000509739ENST00000510445ENST00000511139ENSG00000175745ENST00000327111ENST00000502982ENST00000506162ENST00000512697ENST00000615873ENSG00000237187ENST00000503134ENST00000504474ENST00000507963ENST00000510254ENST00000513055ENST00000606165ENST00000606188ENST00000606233ENST00000606696ENST00000606739ENST00000607112ENST00000607195ENST00000607797ENST00000607831ENSG00000248483ENST00000510627ENST00000606183ENSG00000249353ENST00000502784ENSG00000251023ENST00000505668ENSG00000272406ENST00000606528ENSG00000278905ENST00000623223
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005KH_0001ENSDARG00000052695ENSDART00000133384ENSDARG00000052697ENSDART00000074599ENSDART00000135954ENSDARG00000098045ENSDART00000155405CIL_0005KH_0002ENSG00000113391ENST00000395965ENST00000506398ENST00000509163ENST00000509739ENSG00000175745ENST00000327111ENST00000615873ENSG00000237187ENST00000503134ENST00000507963ENST00000606188ENST00000606233ENST00000606696ENST00000606739ENST00000607797ENST00000607831ENSG00000248483ENST00000510627ENST00000606183ENSG00000249353ENST00000502784ENSG00000251023ENST00000505668ENSG00000272406ENST00000606528ENSG00000278905ENST00000623223
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052695 ENSDART00000133384 N/A N/A N/A 18.300±10.15 N/A N/A 4.498±2.67 2.294±0.49 0.629±0.00 N/A 2.581±0.00 N/A N/A N/A
ENSDARG00000052697 ENSDART00000074599 N/A N/A N/A 9.964±5.90 N/A N/A 14.727±0.00 13.723±0.00 1.217±0.00 N/A N/A N/A N/A N/A
ENSDART00000135954 N/A N/A N/A 1.818±0.81 N/A N/A 2.299±1.22 1.570±0.00 0.672±0.00 N/A N/A N/A N/A N/A
ENSDARG00000098045 ENSDART00000155405 N/A N/A N/A 1.031±0.66 N/A N/A 2.640±2.13 N/A N/A N/A 0.104±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113391 ENST00000395965 1.010±0.00 2.938±0.00 1.176±0.00 4.301±0.11 4.061±1.81 1.962±0.76 1.664±0.66 1.961±1.01 5.019±0.00 2.258±0.25 0.847±0.00 2.664±1.36 1.770±0.31 1.770±0.07
ENST00000502503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506398 N/A N/A N/A N/A N/A 3.473±0.00 N/A N/A N/A N/A N/A N/A N/A 2.890±0.00
ENST00000509163 N/A N/A 3.481±0.00 5.470±0.00 7.723±0.00 5.840±0.00 2.915±0.00 2.060±0.00 7.245±0.00 9.286±0.00 1.185±0.50 2.553±1.27 2.190±0.00 N/A
ENST00000509739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.665±0.00 N/A N/A N/A
ENST00000510445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175745 ENST00000327111 3.579±0.00 14.334±0.00 2.311±0.00 14.802±0.00 2.585±2.01 2.762±2.44 0.115±0.07 7.528±6.97 2.566±0.49 14.395±13.47 0.049±0.00 16.939±19.89 20.675±7.35 6.868±3.22
ENST00000502982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 20.511±0.00 21.360±4.68 N/A
ENSG00000237187 ENST00000503134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A
ENST00000504474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507963 N/A N/A N/A N/A N/A N/A N/A N/A 4.141±0.00 N/A N/A N/A N/A N/A
ENST00000510254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606188 N/A N/A N/A N/A 7.852±0.00 6.398±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606233 N/A N/A N/A 6.016±1.67 N/A N/A N/A N/A N/A N/A 0.026±0.00 0.925±0.00 N/A N/A
ENST00000606696 N/A N/A N/A N/A 1.521±0.00 1.129±0.00 0.148±0.06 N/A 3.706±0.00 2.171±0.00 N/A N/A N/A 2.587±0.00
ENST00000606739 N/A N/A N/A N/A 0.984±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A
ENST00000607831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.223±0.00
ENSG00000248483 ENST00000510627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.138±7.81
ENST00000606183 N/A N/A N/A N/A 1.235±0.00 0.991±0.00 0.442±0.00 0.312±0.00 1.105±0.00 1.669±0.00 0.199±0.00 N/A N/A N/A
ENSG00000249353 ENST00000502784 0.014±0.00 0.044±0.00 0.493±0.00 0.076±0.05 0.574±0.56 0.173±0.16 0.054±0.02 0.219±0.10 0.151±0.14 0.656±0.00 0.074±0.06 0.949±1.12 0.070±0.04 0.077±0.03
ENSG00000251023 ENST00000505668 0.150±0.00 0.298±0.00 0.185±0.00 0.207±0.05 0.210±0.09 0.085±0.01 0.056±0.00 0.101±0.05 0.183±0.12 0.232±0.17 0.022±0.00 0.193±0.08 0.166±0.18 0.239±0.10
ENSG00000272406 ENST00000606528 N/A 0.199±0.00 N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A 0.101±0.03 N/A 0.677±0.05
ENSG00000278905 ENST00000623223 N/A N/A 0.397±0.00 0.088±0.00 N/A N/A N/A N/A 0.028±0.00 N/A N/A 0.036±0.00 0.013±0.00 0.008±0.00

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