C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cut-like homeobox 2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000135006 cux2b-001 ENSDARG00000086345 7955 - 8:4244841-4297985 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000135006
Transcript ID Brain Heart Kidney Liver
ENSDART00000135006 0.383±0.00 0.018±0.01 0.131±0.00 0.104±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001G2 CIL_0001G2_0001 CGP 8:4244841-4559738

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086317 Cux2-002 protein_coding Mus_musculus 0 422
ENSMUST00000111752 Cux2-001 protein_coding Mus_musculus 0 422
ENSMUST00000156942 Cux2-009 protein_coding Mus_musculus 0 239
ENSMUST00000168288 Cux2-201 protein_coding Mus_musculus 0 422
ENST00000261726 CUX2-001 protein_coding Homo_sapiens 0 444
ENST00000292535 CUX1-004 protein_coding Homo_sapiens 0 230
ENST00000360264 CUX1-005 protein_coding Homo_sapiens 0 230
ENST00000546411 CUX1-008 protein_coding Homo_sapiens 0 230
ENST00000549414 CUX1-006 protein_coding Homo_sapiens 0 230
ENST00000550008 CUX1-007 protein_coding Homo_sapiens 0 230
ENST00000556210 CUX1-009 protein_coding Homo_sapiens 0 230

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