C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plexin D1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506979 PLXND1-014 ENSG00000004399 9606 - 3:129556617-129561056 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000506979
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000506979 6.345±0.00 10.732±0.00 5.446±0.00 2.744±0.00 10.376±0.00 6.928±0.00 12.044±0.00 3.777±0.00 7.412±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000314 CIL_000314_0001 CGP 3:129543214-129606818
CIL_000315 CIL_000315_0001 CGP 3:129555175-129893576

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015511 Plxnd1-001 protein_coding Mus_musculus 0 802
ENSDART00000004222 plxnc1-201 protein_coding Danio_rerio 9.00054e-42 174
ENSDART00000135735 plxnc1-001 protein_coding Danio_rerio 9.00054e-42 174
ENSMUST00000060808 Plxnb2-201 protein_coding Mus_musculus 7e-23 111
ENSMUST00000109331 Plxnb2-001 protein_coding Mus_musculus 7e-23 111

Loading