C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plexin D1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000512744 PLXND1-005 ENSG00000004399 9606 - 3:129555218-129565991 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLiverLungMuscleOvaryENST00000512744
Transcript ID Breast Kidney Liver Lung Muscle Ovary
ENST00000512744 1.560±0.00 6.170±0.00 4.775±0.00 10.217±0.00 1.027±0.00 7.149±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000314 CIL_000314_0001 CGP 3:129543214-129606818
CIL_000315 CIL_000315_0001 CGP 3:129555175-129893576

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015511 Plxnd1-001 protein_coding Mus_musculus 0 1925
ENSDART00000123414 PLXND1 (2 of 2)-201 protein_coding Danio_rerio 0 305
ENSDART00000004222 plxnc1-201 protein_coding Danio_rerio 4e-31 141
ENSDART00000135735 plxnc1-001 protein_coding Danio_rerio 4e-31 141
ENSMUST00000060808 Plxnb2-201 protein_coding Mus_musculus 0.00000000000002 86
ENSMUST00000109331 Plxnb2-001 protein_coding Mus_musculus 0.00000000000002 86

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