C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000138765 cacna1aa-002 ENSDARG00000037905 7955 - 3:33876944-33986779 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSDART00000138765
Transcript ID Brain
ENSDART00000138765 3.860±0.28

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0005245 IEA voltage-gated calcium channel activity
GO:0005262 IEA calcium channel activity
GO:0005891 IEA voltage-gated calcium channel complex
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006816 IEA calcium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0055085 IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041342 Cacna1b-002 protein_coding Mus_musculus 0 1068
ENSMUST00000070864 Cacna1b-001 protein_coding Mus_musculus 0 1077
ENSMUST00000100348 Cacna1b-201 protein_coding Mus_musculus 0 1068
ENSMUST00000102939 Cacna1b-004 protein_coding Mus_musculus 0 1079
ENSMUST00000114447 Cacna1b-003 protein_coding Mus_musculus 0 1068
ENST00000277549 CACNA1B-201 protein_coding Homo_sapiens 0 1134
ENST00000277551 CACNA1B-002 protein_coding Homo_sapiens 0 1134
ENST00000288139 CACNA1D-001 protein_coding Homo_sapiens 0.000000006 69
ENST00000350061 CACNA1D-003 protein_coding Homo_sapiens 0.0000000000006 82
ENST00000360228 CACNA1A-001 protein_coding Homo_sapiens 0 1293
ENST00000371355 CACNA1B-202 protein_coding Homo_sapiens 0 1134
ENST00000371357 CACNA1B-005 protein_coding Homo_sapiens 0 1151
ENST00000371363 CACNA1B-003 protein_coding Homo_sapiens 0 1151
ENST00000371372 CACNA1B-001 protein_coding Homo_sapiens 0 1134
ENST00000422281 CACNA1D-002 protein_coding Homo_sapiens 0.0000000000005 82
ENST00000464429 CACNA1D-006 retained_intron Homo_sapiens 0.0000000003 69
ENST00000481085 CACNA1D-007 protein_coding Homo_sapiens 0.0000000005 69
ENST00000481478 CACNA1D-004 protein_coding Homo_sapiens 0.0000000000005 82
ENST00000573710 CACNA1A-002 protein_coding Homo_sapiens 0 1291
ENST00000614285 CACNA1A-201 protein_coding Homo_sapiens 0 1249

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