C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, L type, alpha 1D subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481478 CACNA1D-004 ENSG00000157388 9606 + 3:53666401-53811508 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLungPlacentaENST00000481478
Transcript ID Breast Kidney Lung Placenta
ENST00000481478 0.543±0.00 0.595±0.00 0.617±0.00 0.142±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005245 IEA voltage-gated calcium channel activity
GO:0005891 IEA voltage-gated calcium channel complex
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0055085 IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112250 Cacna1d-202 protein_coding Mus_musculus 0 3411
ENSMUST00000112249 Cacna1d-201 protein_coding Mus_musculus 0 3411
ENSDART00000100118 cacna1da-202 protein_coding Danio_rerio 0 1731
ENSMUST00000187386 Cacna1c-006 protein_coding Mus_musculus 0 1188
ENSMUST00000188865 Cacna1c-020 protein_coding Mus_musculus 0 1188
ENSMUST00000188522 Cacna1c-014 protein_coding Mus_musculus 0 1188
ENSMUST00000187940 Cacna1c-002 protein_coding Mus_musculus 0 1188
ENSMUST00000112790 Cacna1c-005 protein_coding Mus_musculus 0 1188
ENSMUST00000185345 Cacna1c-019 protein_coding Mus_musculus 0 1142
ENSMUST00000190285 Cacna1c-007 protein_coding Mus_musculus 0 1105
ENSMUST00000188078 Cacna1c-015 protein_coding Mus_musculus 0 1105
ENSMUST00000187474 Cacna1c-008 protein_coding Mus_musculus 0 1105
ENSMUST00000075591 Cacna1c-024 protein_coding Mus_musculus 0 1105
ENSMUST00000078320 Cacna1c-004 protein_coding Mus_musculus 0 1105
ENSMUST00000186889 Cacna1c-001 protein_coding Mus_musculus 0 1105
ENSDART00000089956 cacna1da-201 protein_coding Danio_rerio 0 1003
ENSDART00000058276 cacna1da-001 protein_coding Danio_rerio 0 1003
ENSMUST00000115725 Cacna1f-002 protein_coding Mus_musculus 0 721
ENSMUST00000115726 Cacna1f-001 protein_coding Mus_musculus 0 721
ENSMUST00000155090 Cacna1f-003 nonsense_mediated_decay Mus_musculus 0 721
ENSMUST00000141634 Cacna1f-004 retained_intron Mus_musculus 0 684
ENSMUST00000112793 Cacna1c-010 protein_coding Mus_musculus 0 616
ENSMUST00000112064 Cacna1s-201 protein_coding Mus_musculus 0 564
ENSMUST00000161865 Cacna1s-003 protein_coding Mus_musculus 0 564
ENSMUST00000112068 Cacna1s-001 protein_coding Mus_musculus 0 564
ENSMUST00000160641 Cacna1s-002 protein_coding Mus_musculus 0 564
ENSMUST00000188106 Cacna1c-011 protein_coding Mus_musculus 0 544
ENSMUST00000189520 Cacna1c-017 protein_coding Mus_musculus 0 544
ENSMUST00000189389 Cacna1c-016 protein_coding Mus_musculus 0 544
ENSDART00000105895 cacna1sa-001 protein_coding Danio_rerio 0 523
ENSMUST00000187317 Cacna1c-018 protein_coding Mus_musculus 0 499
ENSMUST00000112825 Cacna1c-201 protein_coding Mus_musculus 0 488
ENSMUST00000188181 Cacna1c-012 processed_transcript Mus_musculus 0 488
ENSDART00000028856 cacna1c-201 protein_coding Danio_rerio 0 366
ENSDART00000132909 cacna1c-001 protein_coding Danio_rerio 0 366
ENSDART00000089967 cacna1bb-201 protein_coding Danio_rerio 4e-19 102
ENSDART00000013228 cacna1aa-201 protein_coding Danio_rerio 0.0000000000005 82
ENSDART00000138765 cacna1aa-002 protein_coding Danio_rerio 0.0000000000005 82
ENSDART00000144774 cacna1aa-001 protein_coding Danio_rerio 0.0000000000005 82

Loading