C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 216
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000138783 rnf216-001 ENSDARG00000087893 7955 - 3:40599901-40659650 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000138783
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000138783 3.848±0.01 4.605±2.90 11.885±0.00 2.522±0.00 3.208±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027J CIL_00027J_0001 CGP 3:40571229-40659650

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053498 Rnf216-201 protein_coding Mus_musculus 0 283
ENST00000389900 RNF216-004 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000389902 RNF216-003 protein_coding Homo_sapiens 0 270
ENST00000403969 RNF216P1-005 processed_transcript Homo_sapiens 0.0000000009 69
ENST00000404006 RNF216P1-003 processed_transcript Homo_sapiens 0.000000000000001 90
ENST00000404404 RNF216P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0.0000000004 71
ENST00000405396 RNF216P1-011 processed_transcript Homo_sapiens 0.000000002 68
ENST00000406089 RNF216P1-014 processed_transcript Homo_sapiens 0.0000000001 71
ENST00000406608 RNF216P1-012 processed_transcript Homo_sapiens 3e-16 90
ENST00000407184 RBAK-RBAKDN-001 protein_coding Homo_sapiens 0.0000000006 69
ENST00000425013 RNF216-001 protein_coding Homo_sapiens 0 270
ENST00000429902 RNF216P1-008 processed_transcript Homo_sapiens 0.000000001 68
ENST00000464479 RNF216P1-010 processed_transcript Homo_sapiens 0.0000000003 69
ENST00000466622 RNF216P1-013 processed_transcript Homo_sapiens 2e-16 90
ENST00000493407 RNF216P1-009 processed_transcript Homo_sapiens 0.0000000004 69
ENST00000494947 RNF216P1-006 processed_transcript Homo_sapiens 0.000000002 68

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