C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AT rich interactive domain 1B (SWI1-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000138818 arid1b-001 ENSDARG00000092503 7955 - 20:4939775-5094506 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000138818
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000138818 5.097±3.03 3.354±1.88 1.211±0.15 0.282±0.00 1.831±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005488 IEA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092723 Arid1b-002 protein_coding Mus_musculus 0.000000001 71
ENSMUST00000115797 Arid1b-201 protein_coding Mus_musculus 0.000000002 71
ENST00000346085 ARID1B-001 protein_coding Homo_sapiens 0.000000002 71
ENST00000350026 ARID1B-009 protein_coding Homo_sapiens 0.000000001 71

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