C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxoglutarate (alpha-ketoglutarate) dehydrogenase b (lipoamide)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000139214 ogdhb-001 ENSDARG00000073805 7955 - 10:46151795-46209521 protein_coding

Danio rerio EnsemblZv9

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Genes
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000139214
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000139214 2.255±1.46 1.071±0.00 1.218±0.00 0.735±0.00 3.610±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004591 IEA oxoglutarate dehydrogenase (succinyl-transferring) activity
GO:0006099 IEA tricarboxylic acid cycle
GO:0008152 IEA metabolic process
GO:0016624 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0030976 IEA thiamine pyrophosphate binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003461 Ogdh-001 protein_coding Mus_musculus 0 1637
ENSMUST00000022480 Ogdhl-201 protein_coding Mus_musculus 0 1386
ENSMUST00000081894 Ogdh-003 protein_coding Mus_musculus 0 1520
ENSMUST00000093350 Ogdh-002 protein_coding Mus_musculus 0 1502
ENSMUST00000101554 Ogdh-004 protein_coding Mus_musculus 0 1637
ENST00000222673 OGDH-001 protein_coding Homo_sapiens 0 1788
ENST00000374103 OGDHL-001 protein_coding Homo_sapiens 0 1519
ENST00000419399 OGDHL-201 protein_coding Homo_sapiens 0 1472
ENST00000432695 OGDHL-202 protein_coding Homo_sapiens 0 1471
ENST00000443864 OGDH-007 protein_coding Homo_sapiens 0 652
ENST00000444676 OGDH-006 protein_coding Homo_sapiens 0 1618
ENST00000447398 OGDH-003 protein_coding Homo_sapiens 0 1618
ENST00000449767 OGDH-002 protein_coding Homo_sapiens 0 1666
ENST00000459672 OGDH-009 processed_transcript Homo_sapiens 0 370
ENST00000497326 OGDH-010 retained_intron Homo_sapiens 0 292

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