C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081894 Ogdh-003 ENSMUSG00000020456 10090 + 11:6292605-6356592 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverPlacentaTestisENSMUST00000081894
Transcript ID Brain Colon Liver Placenta Testis
ENSMUST00000081894 3.588±0.00 29.101±8.92 9.841±3.13 10.688±5.99 11.384±1.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000J7 CIL_0000J7_0002 CGP 11:6270369-6356642
CIL_0000J8 CIL_0000J8_0002 CGP 11:6291633-6406158

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004591 IEA oxoglutarate dehydrogenase (succinyl-transferring) activity
GO:0005739 IDA mitochondrion
GO:0006099 IEA tricarboxylic acid cycle
GO:0030976 IEA thiamine pyrophosphate binding
GO:0034602 IDA oxoglutarate dehydrogenase (NAD+) activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000013485 ogdhb-201 protein_coding Danio_rerio 0 1520
ENSDART00000139214 ogdhb-001 protein_coding Danio_rerio 0 1520
ENSDART00000113009 OGDHL-201 protein_coding Danio_rerio 0 965
ENST00000222673 OGDH-001 protein_coding Homo_sapiens 0 3701
ENST00000419661 OGDH-008 protein_coding Homo_sapiens 0 684
ENST00000439616 OGDH-005 protein_coding Homo_sapiens 0 2811
ENST00000443864 OGDH-007 protein_coding Homo_sapiens 0 1435
ENST00000444676 OGDH-006 protein_coding Homo_sapiens 0 3155
ENST00000447398 OGDH-003 protein_coding Homo_sapiens 0 3188
ENST00000449767 OGDH-002 protein_coding Homo_sapiens 0 3940
ENST00000459672 OGDH-009 processed_transcript Homo_sapiens 0 658
ENST00000497326 OGDH-010 retained_intron Homo_sapiens 0 486

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