C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wu:fe11b02
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000143021 wu:fe11b02-208 ENSDARG00000094610 7955 - 7:7267124-7267498 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000143021
Transcript ID Brain Heart Kidney Liver
ENSDART00000143021 0.957±0.00 0.403±0.28 3.807±0.00 0.120±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UC CIL_0000UC_0002 CGP 7:7267124-7269678

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006334 IEA nucleosome assembly
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289316 HIST1H2BD-001 protein_coding Homo_sapiens 0 320
ENST00000369155 HIST2H2BE-001 protein_coding Homo_sapiens 0 324
ENST00000369160 HIST2H2BE-201 protein_coding Homo_sapiens 0 322
ENST00000369167 HIST2H2BF-001 protein_coding Homo_sapiens 0 342
ENST00000377777 HIST1H2BD-002 protein_coding Homo_sapiens 0 320
ENST00000396980 HIST1H2BN-201 protein_coding Homo_sapiens 0 315
ENST00000412169 HIST2H2BA-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 315
ENST00000430394 HIST2H2BA-002 processed_transcript Homo_sapiens 0 307
ENST00000449538 HIST1H2BN-002 nonsense_mediated_decay Homo_sapiens 0 316
ENST00000469483 HIST2H2BF-002 processed_transcript Homo_sapiens 0 335
ENST00000545683 HIST2H2BF-201 protein_coding Homo_sapiens 0 339
ENST00000606613 HIST1H2BN-003 protein_coding Homo_sapiens 0 315
ENST00000612898 HIST1H2BN-001 protein_coding Homo_sapiens 0 316

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