C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: si:dkey-261m9.6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000145542 si:dkey-261m9.6-201 ENSDARG00000093195 7955 + 25:36193392-36193839 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006334 IEA nucleosome assembly
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289316 HIST1H2BD-001 protein_coding Homo_sapiens 0 315
ENST00000369155 HIST2H2BE-001 protein_coding Homo_sapiens 0 331
ENST00000369160 HIST2H2BE-201 protein_coding Homo_sapiens 0 331
ENST00000369167 HIST2H2BF-001 protein_coding Homo_sapiens 0 326
ENST00000377401 HIST1H2BL-001 protein_coding Homo_sapiens 0 320
ENST00000377777 HIST1H2BD-002 protein_coding Homo_sapiens 0 315
ENST00000412169 HIST2H2BA-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 303
ENST00000430394 HIST2H2BA-002 processed_transcript Homo_sapiens 0 303
ENST00000449108 HIST2H2BB-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 298
ENST00000469483 HIST2H2BF-002 processed_transcript Homo_sapiens 0 326
ENST00000545683 HIST2H2BF-201 protein_coding Homo_sapiens 0 326
ENST00000609585 HIST2H2BB-002 processed_transcript Homo_sapiens 0 298
ENST00000614097 HIST1H2BE-001 protein_coding Homo_sapiens 0 298
ENST00000615966 HIST1H2BB-001 protein_coding Homo_sapiens 0 283
ENST00000616182 HIST1H2BO-001 protein_coding Homo_sapiens 0 348

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