C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H2bo
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000616182 HIST1H2BO-001 ENSG00000274641 9606 + 6:27893463-27893843 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000616182
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000616182 0.088±0.00 0.215±0.00 10.355±10.06 27.160±0.00 0.209±0.04 1.076±0.00 1.026±0.00 3.954±3.86 22.110±0.00 0.199±0.05 0.375±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UD CIL_0000UD_0007 CGP 6:27892757-27893843

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 NAS:IEA nucleosome
GO:0003677 NAS:IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 NAS nucleosome assembly
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079251 Hist1h2bg-001 protein_coding Mus_musculus 0 538
ENSMUST00000105106 Hist1h2bf-001 protein_coding Mus_musculus 0 532
ENSMUST00000018246 Hist1h2bc-001 protein_coding Mus_musculus 0 532
ENSMUST00000091709 Hist1h2bn-001 protein_coding Mus_musculus 0 527
ENSMUST00000110467 Hist1h2br-001 protein_coding Mus_musculus 0 527
ENSMUST00000091756 Hist1h2bl-001 protein_coding Mus_musculus 0 527
ENSMUST00000078156 Hist1h2bh-001 protein_coding Mus_musculus 0 527
ENSMUST00000110469 Hist1h2bq-001 protein_coding Mus_musculus 0 527
ENSMUST00000051091 Hist1h2be-001 protein_coding Mus_musculus 0 521
ENSMUST00000091704 Hist1h2be-002 protein_coding Mus_musculus 0 521
ENSMUST00000180288 Hist1h2br-201 protein_coding Mus_musculus 0 520
ENSMUST00000091749 Hist1h2bq-201 protein_coding Mus_musculus 0 520
ENSMUST00000110452 Hist1h2bj-001 protein_coding Mus_musculus 0 516
ENSMUST00000110476 Hist1h2bm-001 protein_coding Mus_musculus 0 516
ENSMUST00000110455 Hist1h2bk-001 protein_coding Mus_musculus 0 507
ENSMUST00000102982 Hist1h2bp-001 protein_coding Mus_musculus 0 505
ENSMUST00000110473 Hist1h2bp-002 protein_coding Mus_musculus 0 497
ENSMUST00000099703 Hist1h2bb-001 protein_coding Mus_musculus 0 494
ENSMUST00000078267 Hist3h2ba-001 protein_coding Mus_musculus 0 470
ENSMUST00000117558 Hist3h2bb-ps-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000177113 Hist2h2bb-001 protein_coding Mus_musculus 0 433
ENSMUST00000052776 Hist1h2ba-001 protein_coding Mus_musculus 0 431
ENSDART00000115210 ano9a-001 protein_coding Danio_rerio 0 385
ENSDART00000114598 ano9a-001 protein_coding Danio_rerio 0 385
ENSDART00000156508 zgc:173587-001 protein_coding Danio_rerio 0 379
ENSDART00000109751 protein_coding Danio_rerio 0 379
ENSDART00000126590 zgc:173587-201 protein_coding Danio_rerio 0 375
ENSDART00000130784 zgc:173587-202 protein_coding Danio_rerio 0 375
ENSDART00000156838 ano9a-001 protein_coding Danio_rerio 0 374
ENSDART00000152761 zgc:171759-001 protein_coding Danio_rerio 0 372
ENSDART00000129255 ano9a-201 protein_coding Danio_rerio 0 370
ENSDART00000146977 zgc:171759-209 protein_coding Danio_rerio 0 368
ENSDART00000152735 zgc:171759-001 protein_coding Danio_rerio 0 364
ENSDART00000157137 si:dkey-261m9.19-001 protein_coding Danio_rerio 0 363
ENSDART00000102959 si:dkey-261m9.19-201 protein_coding Danio_rerio 0 361
ENSDART00000154655 zgc:171759-001 protein_coding Danio_rerio 0 357
ENSDART00000146289 zgc:171759-208 protein_coding Danio_rerio 0 353
ENSDART00000136970 zgc:171759-210 protein_coding Danio_rerio 0 351
ENSDART00000154377 si:dkey-261m9.6-001 protein_coding Danio_rerio 0 351
ENSDART00000155850 zgc:171759-001 protein_coding Danio_rerio 0 350
ENSDART00000050237 zgc:171759-201 protein_coding Danio_rerio 0 348
ENSDART00000145542 si:dkey-261m9.6-201 protein_coding Danio_rerio 0 348
ENSDART00000073457 zgc:194989-001 protein_coding Danio_rerio 0 344
ENSDART00000114767 CABZ01086354.1-201 protein_coding Danio_rerio 0 342
ENSDART00000157206 si:dkey-108k21.11-001 protein_coding Danio_rerio 0 339
ENSDART00000113626 zgc:171759-205 protein_coding Danio_rerio 0 337
ENSDART00000122864 si:dkey-108k21.11-201 protein_coding Danio_rerio 0 337
ENSDART00000122306 wu:fe11b02-204 protein_coding Danio_rerio 0 335
ENSDART00000126724 wu:fe11b02-206 protein_coding Danio_rerio 0 329
ENSDART00000123848 wu:fe11b02-205 protein_coding Danio_rerio 0 326
ENSDART00000114327 wu:fe11b02-201 protein_coding Danio_rerio 0 324
ENSDART00000121649 wu:fe11b02-203 protein_coding Danio_rerio 0 307

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