C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H2bl
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377401 HIST1H2BL-001 ENSG00000185130 9606 - 6:27807444-27807931 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungOvaryTestisENST00000377401
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Ovary Testis
ENST00000377401 0.351±0.00 1.521±0.00 9.934±0.00 12.604±12.47 0.563±0.00 0.193±0.00 6.684±0.00 4.569±7.62 0.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UC CIL_0000UC_0006 CGP 6:27807444-27808701

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 NAS:IEA nucleosome
GO:0003677 NAS:IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 NAS nucleosome assembly
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110452 Hist1h2bj-001 protein_coding Mus_musculus 0 588
ENSMUST00000051091 Hist1h2be-001 protein_coding Mus_musculus 0 582
ENSMUST00000091704 Hist1h2be-002 protein_coding Mus_musculus 0 582
ENSMUST00000105106 Hist1h2bf-001 protein_coding Mus_musculus 0 582
ENSMUST00000102982 Hist1h2bp-001 protein_coding Mus_musculus 0 580
ENSMUST00000079251 Hist1h2bg-001 protein_coding Mus_musculus 0 580
ENSMUST00000091756 Hist1h2bl-001 protein_coding Mus_musculus 0 573
ENSMUST00000110467 Hist1h2br-001 protein_coding Mus_musculus 0 571
ENSMUST00000110469 Hist1h2bq-001 protein_coding Mus_musculus 0 571
ENSMUST00000180288 Hist1h2br-201 protein_coding Mus_musculus 0 568
ENSMUST00000018246 Hist1h2bc-001 protein_coding Mus_musculus 0 568
ENSMUST00000091749 Hist1h2bq-201 protein_coding Mus_musculus 0 568
ENSMUST00000110476 Hist1h2bm-001 protein_coding Mus_musculus 0 562
ENSMUST00000110455 Hist1h2bk-001 protein_coding Mus_musculus 0 560
ENSMUST00000078156 Hist1h2bh-001 protein_coding Mus_musculus 0 549
ENSMUST00000110473 Hist1h2bp-002 protein_coding Mus_musculus 0 547
ENSMUST00000091709 Hist1h2bn-001 protein_coding Mus_musculus 0 545
ENSMUST00000099703 Hist1h2bb-001 protein_coding Mus_musculus 0 516
ENSMUST00000117835 Gm12957-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000078267 Hist3h2ba-001 protein_coding Mus_musculus 0 464
ENSMUST00000177113 Hist2h2bb-001 protein_coding Mus_musculus 0 462
ENSMUST00000090781 Hist2h2be-001 protein_coding Mus_musculus 0 446
ENSMUST00000052776 Hist1h2ba-001 protein_coding Mus_musculus 0 429
ENSDART00000128030 zgc:112234-204 protein_coding Danio_rerio 0 403
ENSDART00000109316 zgc:112234-202 protein_coding Danio_rerio 0 401
ENSDART00000115210 ano9a-001 protein_coding Danio_rerio 0 399
ENSDART00000114598 ano9a-001 protein_coding Danio_rerio 0 399
ENSDART00000124016 zgc:112234-205 protein_coding Danio_rerio 0 398
ENSDART00000109751 protein_coding Danio_rerio 0 387
ENSDART00000123136 zgc:112234-203 protein_coding Danio_rerio 0 375
ENSDART00000156508 zgc:173587-001 protein_coding Danio_rerio 0 372
ENSDART00000152449 zgc:171759-001 protein_coding Danio_rerio 0 366
ENSDART00000152388 zgc:171759-001 protein_coding Danio_rerio 0 364
ENSDART00000057788 zgc:171759-202 protein_coding Danio_rerio 0 359
ENSDART00000156838 ano9a-001 protein_coding Danio_rerio 0 359
ENSDART00000114942 zgc:171759-204 protein_coding Danio_rerio 0 357
ENSDART00000129255 ano9a-201 protein_coding Danio_rerio 0 351
ENSDART00000103017 zgc:171759-203 protein_coding Danio_rerio 0 348
ENSDART00000073457 zgc:194989-001 protein_coding Danio_rerio 0 348
ENSDART00000126590 zgc:173587-201 protein_coding Danio_rerio 0 344
ENSDART00000152735 zgc:171759-001 protein_coding Danio_rerio 0 344
ENSDART00000157137 si:dkey-261m9.19-001 protein_coding Danio_rerio 0 344
ENSDART00000130784 zgc:173587-202 protein_coding Danio_rerio 0 342
ENSDART00000136970 zgc:171759-210 protein_coding Danio_rerio 0 342
ENSDART00000113626 zgc:171759-205 protein_coding Danio_rerio 0 342
ENSDART00000152761 zgc:171759-001 protein_coding Danio_rerio 0 339
ENSDART00000123848 wu:fe11b02-205 protein_coding Danio_rerio 0 339
ENSDART00000102959 si:dkey-261m9.19-201 protein_coding Danio_rerio 0 339
ENSDART00000126724 wu:fe11b02-206 protein_coding Danio_rerio 0 337
ENSDART00000114327 wu:fe11b02-201 protein_coding Danio_rerio 0 333
ENSDART00000146977 zgc:171759-209 protein_coding Danio_rerio 0 331
ENSDART00000114767 CABZ01086354.1-201 protein_coding Danio_rerio 0 329
ENSDART00000154377 si:dkey-261m9.6-001 protein_coding Danio_rerio 0 327
ENSDART00000155850 zgc:171759-001 protein_coding Danio_rerio 0 322
ENSDART00000154655 zgc:171759-001 protein_coding Danio_rerio 0 320
ENSDART00000050237 zgc:171759-201 protein_coding Danio_rerio 0 320
ENSDART00000145542 si:dkey-261m9.6-201 protein_coding Danio_rerio 0 320
ENSDART00000122306 wu:fe11b02-204 protein_coding Danio_rerio 0 315
ENSDART00000146289 zgc:171759-208 protein_coding Danio_rerio 0 313
ENSMUST00000051089 Hist2h2bb-201 protein_coding Mus_musculus 0 261

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