C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: lysyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000148429 kars-001 ENSDARG00000044220 7955 + 7:69488656-69502614 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleENSDART00000148429
Transcript ID Brain Liver Muscle
ENSDART00000148429 9.912±2.03 6.937±0.00 20.721±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004824 IEA lysine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0006418 IEA tRNA aminoacylation for protein translation
GO:0006430 IEA lysyl-tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034426 Kars-201 protein_coding Mus_musculus 0 863
ENSMUST00000093120 Kars-202 protein_coding Mus_musculus 0 863
ENSMUST00000164470 Kars-203 protein_coding Mus_musculus 0 863
ENST00000302445 KARS-001 protein_coding Homo_sapiens 0 885
ENST00000319410 KARS-002 protein_coding Homo_sapiens 0 885
ENST00000562875 KARS-006 nonsense_mediated_decay Homo_sapiens 0 416
ENST00000564578 KARS-004 nonsense_mediated_decay Homo_sapiens 0 880

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