C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, Shaw-related subfamily, member 3a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000148861 kcnc3a-001 ENSDARG00000055855 7955 + 3:32090121-32186755 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENSDART00000148861
Transcript ID Heart
ENSDART00000148861 0.018±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0005249 IEA voltage-gated potassium channel activity
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0005267 IEA potassium channel activity
GO:0005515 IEA protein binding
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006813 IEA potassium ion transport
GO:0008045 IMP motor neuron axon guidance
GO:0008076 IEA voltage-gated potassium channel complex
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0034765 IBA regulation of ion transmembrane transport
GO:0048666 IMP neuron development
GO:0051260 IEA protein homooligomerization
GO:0055085 IEA transmembrane transport
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025202 Kcnc1-001 protein_coding Mus_musculus 0 599
ENSMUST00000160433 Kcnc1-002 protein_coding Mus_musculus 0 599
ENST00000369787 KCNC4-004 protein_coding Homo_sapiens 0 573
ENST00000376959 KCNC3-002 protein_coding Homo_sapiens 0 651
ENST00000413138 KCNC4-006 protein_coding Homo_sapiens 0 573
ENST00000438661 KCNC4-003 protein_coding Homo_sapiens 0 573
ENST00000459877 KCNC4-002 retained_intron Homo_sapiens 0 560
ENST00000469655 KCNC4-001 nonsense_mediated_decay Homo_sapiens 0 573
ENST00000477616 KCNC3-005 protein_coding Homo_sapiens 0 651
ENST00000489935 KCNC4-005 retained_intron Homo_sapiens 0 573

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