C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: si:ch211-117c9.5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000149136 si:ch211-117c9.5-002 ENSDARG00000071235 7955 + 23:6907200-6924930 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENSDART00000149136
Transcript ID Kidney
ENSDART00000149136 6.886±1.57

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0006836 IEA neurotransmitter transport
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253122 SLC6A8-002 protein_coding Homo_sapiens 3e-23 115
ENST00000330048 SLC6A10P-002 processed_transcript Homo_sapiens 1e-21 110
ENST00000430077 SLC6A8-005 protein_coding Homo_sapiens 2e-23 115
ENST00000431994 SLC6A10P-001 transcribed_unprocessed_pseudogene Homo_sapiens 8e-22 110
ENST00000466243 SLC6A8-010 processed_transcript Homo_sapiens 4e-24 115
ENST00000561837 SLC6A10P-003 processed_transcript Homo_sapiens 2e-22 110
ENST00000568600 RP11-598D12.4-001 unprocessed_pseudogene Homo_sapiens 2e-23 115
ENST00000611339 AC136616.1-202 protein_coding Homo_sapiens 3e-23 115
ENST00000613216 AC136616.1-201 protein_coding Homo_sapiens 3e-23 115

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