C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vesicle transport through interaction with t-SNAREs homolog 1A (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000154255 vti1a-201 ENSDARG00000045065 7955 - 12:32845793-33109635 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000154255
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000154255 13.999±9.52 6.808±1.94 1.711±0.00 0.626±0.00 4.503±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PE CIL_0007PE_0003 UCNEbase 12:32666838-33035664

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393077 VTI1A-001 protein_coding Homo_sapiens 0 294
ENST00000432306 VTI1A-009 protein_coding Homo_sapiens 0 294
ENST00000489357 VTI1A-007 processed_transcript Homo_sapiens 3e-39 165
ENST00000496445 VTI1A-008 processed_transcript Homo_sapiens 0 270

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